PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1UWX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	93.1	Mo_IGHV9-3-1*01	84.6	H1	13	H1-13-1	10	KASGYTFTNFGLN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	93.1	Mo_IGHV9-3-1*01	90.0	H2	10	H2-10-1	12	WINTYTGEST	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	93.1	Mo_IGHV9-3-1*01	100.0	H3	16	H3-16-*	-1	ARGFYYYgsRYFYFDY
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	93.1	Mo_IGHV9-3-1*01	100.0	H4	8	H4-8-1	6	LETSASTA	BBAAALBB
K	kappa	Mus.musculus	Mo_IGKV12-98*01	97.1	Mo_IGKV12-98*01	100.0	L1	11	L1-11-1	10	LASQTIGTWLA	BBABBAEABBB
K	kappa	Mus.musculus	Mo_IGKV12-98*01	97.1	Mo_IGKV12-98*01	100.0	L2	8	L2-8-1	3	YAATSLAD	BLLABBBB
K	kappa	Mus.musculus	Mo_IGKV12-98*01	97.1	Mo_IGKV12-98*01	85.7	L3	9	L3-9-cis7-1	21	QQLSSTPYT	BBAABBbBB
K	kappa	Mus.musculus	Mo_IGKV12-98*01	97.1	Mo_IGKV12-98*01	100.0	L4	6	L4-6-1	10	GSGTKF	EBEABB
L	kappa	Mus.musculus	Mo_IGKV12-98*01	97.1	Mo_IGKV12-98*01	100.0	L1	11	L1-11-1	9	LASQTIGTWLA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV12-98*01	97.1	Mo_IGKV12-98*01	100.0	L2	8	L2-8-1	4	YAATSLAD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV12-98*01	97.1	Mo_IGKV12-98*01	85.7	L3	9	L3-9-cis7-1	22	QQLSSTPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV12-98*01	97.1	Mo_IGKV12-98*01	100.0	L4	6	L4-6-1	11	GSGTKF	EBEABB
M	heavy	Mus.musculus	Mo_IGHV9-3-1*01	93.1	Mo_IGHV9-3-1*01	84.6	H1	13	H1-13-1	11	KASGYTFTNFGLN	BBBLBBAAABBBB
M	heavy	Mus.musculus	Mo_IGHV9-3-1*01	93.1	Mo_IGHV9-3-1*01	90.0	H2	10	H2-10-1	12	WINTYTGEST	BBBAAALBBB
M	heavy	Mus.musculus	Mo_IGHV9-3-1*01	93.1	Mo_IGHV9-3-1*01	100.0	H3	16	H3-16-*	-1	ARGFYYYgsRYFYFDY
M	heavy	Mus.musculus	Mo_IGHV9-3-1*01	93.1	Mo_IGHV9-3-1*01	100.0	H4	8	H4-8-1	6	LETSASTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022