PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1UM4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Mo_IGHV1-14*01	90.3	Mo_IGHV1-14*01	61.5	H1	13	H1-13-*	-1	KASEYTLTSYLFQ	BBABABBBBBBBB
H	heavy	Homo.sapiens	Mo_IGHV1-14*01	90.3	Mo_IGHV1-14*01	80.0	H2	10	H2-10-1	12	YIYPYNGGTR	BBBAAALBBB
H	heavy	Homo.sapiens	Mo_IGHV1-14*01	90.3	Mo_IGHV1-14*01	100.0	H3	11	H3-11-*	-1	ARSSMSDPGAN	BBBBAABBLAB
H	heavy	Homo.sapiens	Mo_IGHV1-14*01	90.3	Mo_IGHV1-14*01	87.5	H4	8	H4-8-1	12	SDKSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV9-124*01	100.0	Mo_IGKV9-124*01	90.9	L1	11	L1-11-2	7	RASQEISGYLY	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV9-124*01	100.0	Mo_IGKV9-124*01	87.5	L2	8	L2-8-*	-1	YAGSTLDS	BLLABBBA
L	kappa	Mus.musculus	Mo_IGKV9-124*01	100.0	Mo_IGKV9-124*01	100.0	L3	9	L3-9-cis7-1	10	LQYASYPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV9-124*01	100.0	Mo_IGKV9-124*01	100.0	L4	6	L4-6-2	15	RSGSDY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022