PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1UCB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	92.3	H1	13	H1-13-1	13	VTSGFTFSDYYMY	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	60.0	H2	10	H2-10-2	11	YISQGGDITD	BBBAALABBB
H	heavy	Homo.sapiens	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	100.0	H3	12	H3-12-*	-1	ARGLDDGAWFAY	BBBBAALBABAB
H	heavy	Homo.sapiens	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	87.5	H4	8	H4-8-1	8	RDNAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	87.5	L1	16	L1-16-*	-1	RSSQIIvhnngNTYLE	BBABBABBBLBBBBBB
L	kappa	Homo.sapiens	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	6	YKVSNRFS	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	19	FQGSHVPFT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L4	6	L4-6-2	17	GSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022