PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1T2J

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	84.6	H1	13	H1-13-1	11	AASGFTFSNSAMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	80.0	H2	10	H2-10-2	9	SISGSGGNTY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	50.0	H3	9	H3-9-*	-1	ARDWYGMDV	BABAALABB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	75.0	H4	8	H4-8-1	4	RDNAKNSL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022