PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1SM3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV6-6*02	95.9	Mo_IGHV6-6*02	100.0	H1	13	H1-13-1	9	VASGFTFSNYWMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV6-6*02	95.9	Mo_IGHV6-6*02	100.0	H2	12	H2-12-1	9	EIRlkSNNYATH	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV6-6*02	95.9	Mo_IGHV6-6*02	50.0	H3	8	H3-8-*	-1	TGVGQFAY	BBELaAAB
H	heavy	Mus.musculus	Mo_IGHV6-6*02	95.9	Mo_IGHV6-6*02	100.0	H4	8	H4-8-1	6	RDDSKSSV	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L1	14	L1-14-1	7	RSSTGAVTtSNYAN	BBAAEBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L2	8	L2-8-1	8	GGTNNRAP	BLEABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	10	ALWYSNHWV	BBBBLABBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	16	LIGDKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022