PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1SHM

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	53.8	H1	13	H1-13-*	-1	AASGATGSTYDMG	BBBEBAABBBBBB
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	CDRLenMismatch	-1.0	H2	10	H2-10-1	10	AINWGSAGTY	BBBAAALBBB
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	GAGRIgrsvfnlrRESWVTW
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	87.5	H4	8	H4-8-1	6	RDNAKKTV	BBAAALBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	53.8	H1	13	H1-13-*	-1	AASGATGSTYDMG	BBBEBAABBBBBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	CDRLenMismatch	-1.0	H2	10	H2-10-1	8	AINWGSAGTY	BBBAAALBBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	GAGRIgrsvfnlrrESWVTW
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	87.5	H4	8	H4-8-1	10	RDNAKKTV	BBAAALBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	53.8	H1	13	H1-13-*	-1	AASgatgSTYDMG
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	CDRLenMismatch	-1.0	H2	10	H2-10-1	7	AINWGSAGTY	BBBAAALBBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	GAGRIgrsvfnlrrESWVTW
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	87.5	H4	8	H4-8-1	6	RDNAKKTV	BBAAALBB
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	53.8	H1	13	H1-13-*	-1	AASGATGSTYDMG	BBBELABAABBBB
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	CDRLenMismatch	-1.0	H2	10	H2-10-1	10	AINWGSAGTY	BBBAAALBBB
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	GAGRIgrsvfnlrRESWVTW
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.3	La_IGHV1S3*01_VHH	87.5	H4	8	H4-8-1	7	RDNAKKTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022