PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1SEQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.9	Mo_IGHV5-12-2*01	92.3	H1	13	H1-13-1	11	AASGFTFSTYTMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.9	Mo_IGHV5-12-2*01	90.0	H2	10	H2-10-2	6	YISKGGGSTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.9	Mo_IGHV5-12-2*01	100.0	H3	16	H3-16-*	-1	ARGAMFgnDFKYPMDR
H	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.9	Mo_IGHV5-12-2*01	100.0	H4	8	H4-8-1	4	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-80*01	91.3	Mo_IGKV4-80*01	100.0	L1	10	L1-10-1	8	SASSSVSYMH	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-80*01	91.3	Mo_IGKV4-80*01	87.5	L2	8	L2-8-1	4	YTTSNLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV4-80*01	91.3	Mo_IGKV4-80*01	100.0	L3	9	L3-9-cis7-1	10	HQWSSYPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-80*01	91.3	Mo_IGKV4-80*01	100.0	L4	6	L4-6-1	13	GSGTFY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022