PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1SBS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	100.0	H1	13	H1-13-1	8	VASGFTFSNYWMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	83.3	H2	12	H2-12-1	11	DIRlkSNNYATL	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	100.0	H3	14	H3-14-*	-1	TRGAYYRYDYAMDY	BBBBABAABABBAB
H	heavy	Mus.musculus	Mo_IGHV6-6*02	98.6	Mo_IGHV6-6*02	100.0	H4	8	H4-8-1	4	RDDSKSSV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	7	KSSQSLlyssnqMNYLA	BBABBABBAAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	85.7	L3	9	L3-9-cis7-1	5	QQYHSYPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022