PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1RZ8

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	81.8	L1	11	L1-11-1	10	RASESVSSDLA	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	100.0	L2	8	L2-8-1	9	YGASTRAT	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	100.0	L3	11	L3-11-*	-1	QQYNNWPprYT	BBBABBbBBBB
A	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	83.3	L4	6	L4-6-1	11	GSGAEF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV1-69*08	84.9	Hu_IGHV1-69*08	53.8	H1	13	H1-13-*	-1	KASGDTFIRYSFT	BBBEBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*08	84.9	Hu_IGHV1-69*08	60.0	H2	10	H2-10-1	19	RIITILDVAH	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*08	84.9	Hu_IGHV1-69*08	50.0	H3	21	H3-21-*	-1	AgvyegeaDEGEYDNNGFLKH
B	heavy	Homo.sapiens	Hu_IGHV1-69*08	84.9	Hu_IGHV1-69*08	87.5	H4	8	H4-8-1	8	ADKSTSTV	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	81.8	L1	11	L1-11-1	10	RASESVSSDLA	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	100.0	L2	8	L2-8-1	11	YGASTRAT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	100.0	L3	11	L3-11-*	-1	QQYNNWPprYT	BBAABBbBBBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	83.3	L4	6	L4-6-1	8	GSGAEF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV1-69*08	84.9	Hu_IGHV1-69*08	53.8	H1	13	H1-13-1	12	KASGDTFIRYSFT	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*08	84.9	Hu_IGHV1-69*08	60.0	H2	10	H2-10-1	20	RIITILDVAH	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*08	84.9	Hu_IGHV1-69*08	50.0	H3	21	H3-21-*	-1	AgvyegeaDEGEYDNNGFLKH
D	heavy	Homo.sapiens	Hu_IGHV1-69*08	84.9	Hu_IGHV1-69*08	87.5	H4	8	H4-8-1	7	ADKSTSTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022