PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1RVF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-80*01	93.0	Mo_IGHV1-80*01	84.6	H1	13	H1-13-*	-1	KASGYAFSSFWVN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-80*01	93.0	Mo_IGHV1-80*01	80.0	H2	10	H2-10-1	23	QIYPGDGDNK	EBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-80*01	93.0	Mo_IGHV1-80*01	100.0	H3	12	H3-12-*	-1	ARSGNYPYAMDY	BBBLALABBBAB
H	heavy	Mus.musculus	Mo_IGHV1-80*01	93.0	Mo_IGHV1-80*01	87.5	H4	8	H4-8-1	22	ADKSSTTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	98.6	Mo_IGKV4-57*01	80.0	L1	10	L1-10-*	-1	SATSSVNYMH	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	98.6	Mo_IGKV4-57*01	87.5	L2	8	L2-8-1	22	YSSSNLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	98.6	Mo_IGKV4-57*01	87.5	L3	9	L3-9-*	-1	QQRSSYPIT	BBAABABBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	98.6	Mo_IGKV4-57*01	100.0	L4	6	L4-6-1	27	GSGTSY	EEEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022