PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1RUR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-63*02	84.9	Mo_IGHV1-63*02	84.6	H1	13	H1-13-1	5	KASGYTFTNYWLG	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-63*02	84.9	Mo_IGHV1-63*02	80.0	H2	10	H2-10-*	-1	DIYPGGVYTT	BBBAAAbBBB
H	heavy	Mus.musculus	Mo_IGHV1-63*02	84.9	Mo_IGHV1-63*02	100.0	H3	12	H3-12-*	-1	ARAGGYYTGGDY	BBBAEBLAEBAB
H	heavy	Mus.musculus	Mo_IGHV1-63*02	84.9	Mo_IGHV1-63*02	100.0	H4	8	H4-8-1	6	ADTSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV2-109*01	94.2	Mo_IGKV2-109*01	75.0	L1	16	L1-16-1	10	RSSKSLLNsngiiHMY	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV2-109*01	94.2	Mo_IGKV2-109*01	87.5	L2	8	L2-8-1	5	YQMSKLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV2-109*01	94.2	Mo_IGKV2-109*01	100.0	L3	9	L3-9-cis7-1	10	AQNLELPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV2-109*01	94.2	Mo_IGKV2-109*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EALABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022