PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1RMF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S137*01	93.2	Mo_IGHV1S137*01	84.6	H1	13	H1-13-1	19	KGSGYTFIDYAIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	93.2	Mo_IGHV1S137*01	60.0	H2	10	H2-10-*	-1	VISAYSGDTN	BBEEBBBBEB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	93.2	Mo_IGHV1S137*01	100.0	H3	12	H3-12-*	-1	ARGGWLLLSFDY	BBBBBABBEBAB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	93.2	Mo_IGHV1S137*01	87.5	H4	8	H4-8-1	21	VDKSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	93.8	L1	16	L1-16-1	13	RSSQSLvhsngNNYLH	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L2	8	L2-8-4	18	YKVSNRFS	BEAABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L3	9	L3-9-cis7-1	16	SQSTHVPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022