PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1REI

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	19	QASQDIIKYLN	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	62.5	L2	8	L2-8-1	19	YEASNLQA	BLEABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	10	QQYQSlPYT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	13	GSGTDY	EBEABB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	21	QASQDIIKYLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	62.5	L2	8	L2-8-1	16	YEASNLQA	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	9	QQYQSlPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	14	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022