PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1R3K

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	90.9	L1	11	L1-11-1	12	RASQSIGTDIH	BBABBAEABBB
A	kappa	Mus.musculus	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	100.0	L2	8	L2-8-1	22	KYASESIS	BLEABBBB
A	kappa	Mus.musculus	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	85.7	L3	9	L3-9-cis7-*	-1	QQSNRWPFT	BALABBbBB
A	kappa	Mus.musculus	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	84.6	H1	13	H1-13-*	-1	KASGYTFTSDWIH	BBBEBBBAABBBB
B	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	70.0	H2	10	H2-10-1	21	EIIPSYGRAN	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	100.0	H3	11	H3-11-*	-1	ARERGDGYFAV	BBBALALBBAB
B	heavy	Mus.musculus	Mo_IGHV1S81*02	90.4	Mo_IGHV1S81*02	87.5	H4	8	H4-8-1	14	ADKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022