PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1R24

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV10-96*02	88.4	Mo_IGKV10-96*02	81.8	L1	11	L1-11-2	31	RASQDIGNFLN	BBABBALLABB
A	kappa	Mus.musculus	Mo_IGKV10-96*02	88.4	Mo_IGKV10-96*02	87.5	L2	8	L2-8-1	14	YYTSRLQS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV10-96*02	88.4	Mo_IGKV10-96*02	85.7	L3	9	L3-9-cis7-1	22	QQGKTLPYT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV10-96*02	88.4	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	14	GSGTDY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	92.3	H1	13	H1-13-1	23	AASGFTFSNFGMH	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	70.0	H2	10	H2-10-*	-1	YISSGGSSIN	BBBBLLABBB
B	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	50.0	H3	15	H3-15-*	-1	TRGGTGtRSLYYFDY
B	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100.0	H4	8	H4-8-1	28	RDNPKNTL	BAAAALBB
C	kappa	Mus.musculus	Mo_IGKV10-96*02	88.4	Mo_IGKV10-96*02	81.8	L1	11	L1-11-*	-1	RASQDIGNFLN	BBABBALLABB
C	kappa	Mus.musculus	Mo_IGKV10-96*02	88.4	Mo_IGKV10-96*02	87.5	L2	8	L2-8-1	17	YYTSRLQS	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV10-96*02	88.4	Mo_IGKV10-96*02	85.7	L3	9	L3-9-cis7-1	15	QQGKTLPYT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV10-96*02	88.4	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	17	GSGTDY	EBEABB
D	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	92.3	H1	13	H1-13-1	16	AASGFTFSNFGMH	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	70.0	H2	10	H2-10-4	18	YISSGGSSIN	BBBBLLABBB
D	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	50.0	H3	15	H3-15-*	-1	TRGGTGtRSLYYFDY
D	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100.0	H4	8	H4-8-*	-1	RDNPKNTL	BBABEEBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022