PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1QP1

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-2	9	QASQDISDYLI	BBABBALLBBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	6	YDASTLET	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	6	QQYDDlPYT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	66.7	L4	6	L4-6-1	7	GSGTEY	EBEABB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-2	6	QASQDISDYLI	BBABBALLBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	7	YDASTLET	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	7	QQYDDlPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	66.7	L4	6	L4-6-1	11	GSGTEY	EEEABB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-2	8	QASQDISDYLI	BBABBALLBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	7	YDASTLET	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	9	QQYDDlPYT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	66.7	L4	6	L4-6-1	6	GSGTEY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022