PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1QOK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV14-4*02	89.0	Mo_IGHV14-4*02	92.3	H1	13	H1-13-1	21	TASGFNIKDSYMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV14-4*02	89.0	Mo_IGHV14-4*02	100.0	H2	10	H2-10-1	9	WIDPENGDTE	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV14-4*02	89.0	Mo_IGHV14-4*02	50.0	H3	13	H3-13-*	-1	NEGTPTGPYYFDY	BBBBABEBBABBB
A	heavy	Mus.musculus	Mo_IGHV14-4*02	89.0	Mo_IGHV14-4*02	87.5	H4	8	H4-8-1	9	TDTSSNTA	BBAAALBB
A	kappa	Mus.musculus	Mo_IGKV4-57*01	100.0	Mo_IGKV4-57*01	100.0	L1	10	L1-10-1	9	SASSSVSYMH	BBABBBABBB
A	kappa	Mus.musculus	Mo_IGKV4-57*01	100.0	Mo_IGKV4-57*01	100.0	L2	8	L2-8-1	6	YSTSNLAS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV4-57*01	100.0	Mo_IGKV4-57*01	87.5	L3	9	L3-9-cis7-1	7	QQRSSYPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV4-57*01	100.0	Mo_IGKV4-57*01	100.0	L4	6	L4-6-1	8	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022