PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1QNZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-47*01	97.3	Mo_IGHV1-47*01	100.0	H1	13	H1-13-*	-1	KASGYTFTTYPIE	BBBLBAEAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-47*01	97.3	Mo_IGHV1-47*01	80.0	H2	10	H2-10-1	19	NFHPYSDDTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-47*01	97.3	Mo_IGHV1-47*01	50.0	H3	12	H3-12-*	-1	AIHYGSAYAMDY	BBBAABAABBAB
H	heavy	Mus.musculus	Mo_IGHV1-47*01	97.3	Mo_IGHV1-47*01	100.0	H4	8	H4-8-1	17	VEKSSSTV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L1	15	L1-15-*	-1	KASQSVDydgdSYMN	BBABBABBBLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L2	8	L2-8-1	18	YAASNLES	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L3	9	L3-9-cis7-1	14	QQSNEDPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	83.3	L4	6	L4-6-2	26	GSRTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022