PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1QBM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H1	13	H1-13-1	15	TASGFNIKDTYMH	BBBLEBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	90.0	H2	10	H2-10-1	9	RIDPASGNTK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	50.0	H3	10	H3-10-*	-1	AGYDYGNFDY	BBBAABABBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	14	ADTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L1	11	L1-11-2	9	RASGNIHNYLA	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L2	8	L2-8-1	8	YNAKTLAD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L3	9	L3-9-cis7-1	20	QHFWSTPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L4	6	L4-6-1	11	GSGTQY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022