PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1PSK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	92.3	H1	13	H1-13-1	14	KTSGYTFTKYTMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	80.0	H2	10	H2-10-3	12	DINPNNGGTN	BBBBEALBBB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	0.0	H3	7	H3-7-*	-1	TSKSFDY	BBLLLAB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	75.0	H4	8	H4-8-1	10	VHKSSTTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	95.7	Mo_IGKV4-57*01	80.0	L1	10	L1-10-1	9	SASSSVSNIH	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	95.7	Mo_IGKV4-57*01	87.5	L2	8	L2-8-1	14	YSTSTLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	95.7	Mo_IGKV4-57*01	75.0	L3	9	L3-9-cis7-1	16	QQRSGYPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	95.7	Mo_IGKV4-57*01	100.0	L4	6	L4-6-1	11	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022