PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1P4I

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV2-6-7*01	90.3	Mo_IGHV2-6-7*01	92.3	H1	13	H1-13-1	14	TVSGFSLTDYGVN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-6-7*01	90.3	Mo_IGHV2-6-7*01	77.8	H2	9	H2-9-*	-1	VIWGDGITD	BBBABABBB
H	heavy	Mus.musculus	Mo_IGHV2-6-7*01	90.3	Mo_IGHV2-6-7*01	0.0	H3	7	H3-7-*	-1	VTGLFDY	BEALLAB
H	heavy	Mus.musculus	Mo_IGHV2-6-7*01	90.3	Mo_IGHV2-6-7*01	100.0	H4	8	H4-8-1	10	KDNSKSQV	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	92.9	L1	14	L1-14-1	15	RSSTGAVTtSNYAS	BBAAEBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L2	8	L2-8-1	12	GGTNNRAP	BLEABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-3	16	ALWYSNHWV	BBBBAABBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	19	LIGDKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022