PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1P2C

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	100.0	L1	11	L1-11-1	6	RASQSISNNLH	BBABBAEABBB
A	kappa	Mus.musculus	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	75.0	L2	8	L2-8-1	9	KYTSQSMS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	85.7	L3	9	L3-9-cis7-1	13	QQSGSWPRT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	92.3	H1	13	H1-13-1	11	KATGYTFTTYWIE	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	80.0	H2	10	H2-10-3	17	EILPGSDSTY	BBBBLALBBB
B	heavy	Mus.musculus	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	100.0	H3	9	H3-9-*	-1	ARGDGFYVY	BBBAEBBAB
B	heavy	Mus.musculus	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	87.5	H4	8	H4-8-1	12	ADASSNTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	100.0	L1	11	L1-11-1	6	RASQSISNNLH	BBABBAEABBB
D	kappa	Mus.musculus	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	75.0	L2	8	L2-8-1	11	KYTSQSMS	BLEABBBB
D	kappa	Mus.musculus	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	85.7	L3	9	L3-9-cis7-1	13	QQSGSWPRT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV5-43*01	97.1	Mo_IGKV5-43*01	100.0	L4	6	L4-6-1	10	GSGTDF	EEEABB
E	heavy	Mus.musculus	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	92.3	H1	13	H1-13-1	10	KATGYTFTTYWIE	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	80.0	H2	10	H2-10-3	15	EILPGSDSTY	BBBBLALBBB
E	heavy	Mus.musculus	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	100.0	H3	9	H3-9-*	-1	ARGDGFYVY	BBBAEBBAB
E	heavy	Mus.musculus	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	87.5	H4	8	H4-8-1	10	ADASSNTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022