PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1OPG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-9-2*01	94.5	Mo_IGHV5-9-2*01	100.0	H1	13	H1-13-1	8	AASGFTFSSYGMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-9-2*01	94.5	Mo_IGHV5-9-2*01	60.0	H2	10	H2-10-*	-1	AISGGGTYIH	BBBAAEBLBB
H	heavy	Mus.musculus	Mo_IGHV5-9-2*01	94.5	Mo_IGHV5-9-2*01	50.0	H3	18	H3-18-*	-1	TRHPFYRydggNYYAMDH
H	heavy	Mus.musculus	Mo_IGHV5-9-2*01	94.5	Mo_IGHV5-9-2*01	100.0	H4	8	H4-8-1	10	RDNAKNNL	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV5-43*01	98.5	Mo_IGKV5-43*01	100.0	L1	11	L1-11-*	-1	RASQSISNNLH	BBABALEAABB
L	kappa	Homo.sapiens	Mo_IGKV5-43*01	98.5	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS	BLLABBAE
L	kappa	Homo.sapiens	Mo_IGKV5-43*01	98.5	Mo_IGKV5-43*01	100.0	L3	9	L3-9-cis7-1	18	QQSNSWPLT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV5-43*01	98.5	Mo_IGKV5-43*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022