PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1OB1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV4-74*01	92.8	Mo_IGKV4-74*01	83.3	L1	12	L1-12-*	-1	TATSSLSsSYLH	BBABBBABABBB
A	kappa	Mus.musculus	Mo_IGKV4-74*01	92.8	Mo_IGKV4-74*01	87.5	L2	8	L2-8-1	8	YTTSNLAS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV4-74*01	92.8	Mo_IGKV4-74*01	62.5	L3	9	L3-9-cis7-1	22	HQFHHSPYT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV4-74*01	92.8	Mo_IGKV4-74*01	100.0	L4	6	L4-6-1	21	GSGTSY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV9-4*03	90.0	Mo_IGHV9-4*03	92.3	H1	13	H1-13-1	11	KASGYTFTTAGIQ	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV9-4*03	90.0	Mo_IGHV9-4*03	90.0	H2	10	H2-10-1	22	WINTHSGVPQ	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV9-4*03	90.0	Mo_IGHV9-4*03	0.0	H3	13	H3-13-*	-1	ARNYYRFDGGMDF	BBBBAAAEABBBE
B	heavy	Mus.musculus	Mo_IGHV9-4*03	90.0	Mo_IGHV9-4*03	100.0	H4	8	H4-8-1	19	LETSASTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV4-74*01	92.8	Mo_IGKV4-74*01	83.3	L1	12	L1-12-*	-1	TATSSLSsSYLH	BBABBBABABBB
D	kappa	Mus.musculus	Mo_IGKV4-74*01	92.8	Mo_IGKV4-74*01	87.5	L2	8	L2-8-1	10	YTTSNLAS	BLEABBBB
D	kappa	Mus.musculus	Mo_IGKV4-74*01	92.8	Mo_IGKV4-74*01	62.5	L3	9	L3-9-cis7-1	22	HQFHHSPYT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV4-74*01	92.8	Mo_IGKV4-74*01	100.0	L4	6	L4-6-1	19	GSGTSY	EBEABB
E	heavy	Mus.musculus	Mo_IGHV9-4*03	90.0	Mo_IGHV9-4*03	92.3	H1	13	H1-13-1	11	KASGYTFTTAGIQ	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV9-4*03	90.0	Mo_IGHV9-4*03	90.0	H2	10	H2-10-1	23	WINTHSGVPQ	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV9-4*03	90.0	Mo_IGHV9-4*03	0.0	H3	13	H3-13-*	-1	ARNYYRFDGGMDF	BBBBAAALLBBBL
E	heavy	Mus.musculus	Mo_IGHV9-4*03	90.0	Mo_IGHV9-4*03	100.0	H4	8	H4-8-1	18	LETSASTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022