PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1OAR

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	100.0	H1	13	H1-13-1	9	KASGYTFTSYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	90.0	H2	10	H2-10-6	11	RIDPNGGGTK	BBBABLLBBB
H	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	0.0	H3	13	H3-13-*	-1	ARMWYYGTYYFDY	BBBBABLBBBBAB
H	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	100.0	H4	8	H4-8-1	10	VDKPSSTA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	100.0	H1	13	H1-13-1	13	KASGYTFTSYWMH	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	90.0	H2	10	H2-10-*	-1	RIDpnggGTK
I	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	0.0	H3	13	H3-13-*	-1	ARMWYYGTYYFDY	BBBBABLEBBBAB
I	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	100.0	H4	8	H4-8-*	-1	VdkpsSTA
J	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	100.0	H1	13	H1-13-1	9	KASGYTFTSYWMH	BBBLBBAAABBBB
J	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	90.0	H2	10	H2-10-6	11	RIDPNGGGTK	BBBABLLBBB
J	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	0.0	H3	13	H3-13-*	-1	ARMWYYGTYYFDY	BBBBABLBBBBAB
J	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	100.0	H4	8	H4-8-1	10	VDKPSSTA	BBAAALBB
K	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	100.0	H1	13	H1-13-*	-1	KasgytfTSYWMH
K	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	90.0	H2	10	H2-10-*	-1	RIDpnggGTK
K	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	0.0	H3	13	H3-13-*	-1	ARMWYYGTYYFDY	BBBBABLBBBBAB
K	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	100.0	H4	8	H4-8-*	-1	VdkpsSTA
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L1	14	L1-14-1	5	RSSTGAVTtSNYAN	BBAAEBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L2	8	L2-8-1	6	GGTNNRAP	BLEABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	87.5	L3	9	L3-9-4	19	ALWYSNHLV	BBBBLABBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	83.3	L4	6	L4-6-2	16	LIGNKA	BBEABB
M	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L1	14	L1-14-*	-1	RsstgAVTtSNYAN
M	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L2	8	L2-8-1	7	GGTNNRAP	BLEABBBB
M	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	87.5	L3	9	L3-9-4	19	ALWYSNHLV	BBBBLABBB
M	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	83.3	L4	6	L4-6-2	13	LIGNKA	BBEABB
N	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L1	14	L1-14-1	5	RSSTGAVTtSNYAN	BBAAEBBBAAALBB
N	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L2	8	L2-8-1	6	GGTNNRAP	BLEABBBB
N	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	87.5	L3	9	L3-9-4	19	ALWYSNHLV	BBBBLABBB
N	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	83.3	L4	6	L4-6-2	16	LIGNKA	BBEABB
O	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L1	14	L1-14-*	-1	RSSTgAVTtSNYAN
O	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L2	8	L2-8-1	7	GGTNNRAP	BLEABBBB
O	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	87.5	L3	9	L3-9-4	19	ALWYSNHLV	BBBBLABBB
O	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	83.3	L4	6	L4-6-2	13	LIGNKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022