PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1NSN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-2*02	94.4	Mo_IGHV3-2*02	100.0	H1	14	H1-14-*	-1	TVTGYSITsDYAWN	BBBLBAEEAEABBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	94.4	Mo_IGHV3-2*02	77.8	H2	9	H2-9-1	24	YITYSGTTS	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	94.4	Mo_IGHV3-2*02	50.0	H3	6	H3-6-*	-1	TRGNGD	BBALEE
H	heavy	Mus.musculus	Mo_IGHV3-2*02	94.4	Mo_IGHV3-2*02	100.0	H4	8	H4-8-1	27	RDTSKNQF	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	86.7	L1	15	L1-15-*	-1	RASQSVSTssfrYMH	BBABBBBAALBLBBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L2	8	L2-8-*	-1	KYASNLES	ABEBLBBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L3	9	L3-9-cis7-1	18	QHSWEIPYT	BBBABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	17	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022