PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1NMA

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S121*01	91.8	Mo_IGHV1S121*01	84.6	H1	13	H1-13-1	16	KASGYTFTNYNMY	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S121*01	91.8	Mo_IGHV1S121*01	80.0	H2	10	H2-10-1	21	IFYPGNGDTS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S121*01	91.8	Mo_IGHV1S121*01	0.0	H3	15	H3-15-*	-1	ARSGGsYRYDGGFDY
H	heavy	Mus.musculus	Mo_IGHV1S121*01	91.8	Mo_IGHV1S121*01	87.5	H4	8	H4-8-1	13	ADKSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	100.0	L1	11	L1-11-1	16	RASQDISNYLN	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	87.5	L2	8	L2-8-*	-1	YYTSNLHS	BLLABBBA
L	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	71.4	L3	9	L3-9-cis7-1	14	QQDFTLPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	20	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022