PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1NLD

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV2-2*03	93.2	Mo_IGHV2-2*03	92.3	H1	13	H1-13-1	17	TVSGFSLTCYGVH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-2*03	93.2	Mo_IGHV2-2*03	88.9	H2	9	H2-9-1	12	VIWSGGDTD	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV2-2*03	93.2	Mo_IGHV2-2*03	100.0	H3	7	H3-7-*	-1	ARRGGDF	BBABBBB
H	heavy	Mus.musculus	Mo_IGHV2-2*03	93.2	Mo_IGHV2-2*03	100.0	H4	8	H4-8-1	15	KDNSKSQV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L1	16	L1-16-1	10	KSSQSLldsdgKTYLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L2	8	L2-8-1	9	YLVSKLDS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L3	9	L3-9-*	-1	WQGTHFPRT	BBAABAALB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022