PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1NCD

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV9-3*02	93.2	Mo_IGHV9-3*02	100.0	H1	13	H1-13-1	18	KASGYTFTNYGMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-3*02	93.2	Mo_IGHV9-3*02	100.0	H2	10	H2-10-1	16	WINTNTGEPT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-3*02	93.2	Mo_IGHV9-3*02	100.0	H3	13	H3-13-*	-1	ARGEDNFGSLSDY	BBBABBLLABBBL
H	heavy	Mus.musculus	Mo_IGHV9-3*02	93.2	Mo_IGHV9-3*02	100.0	H4	8	H4-8-1	15	LETSASTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-25*01	95.7	Mo_IGKV6-25*01	90.9	L1	11	L1-11-2	13	KASQDVSTAVV	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV6-25*01	95.7	Mo_IGKV6-25*01	87.5	L2	8	L2-8-1	11	YWASTRHI	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-25*01	95.7	Mo_IGKV6-25*01	85.7	L3	9	L3-9-cis7-1	18	QQHYSPPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-25*01	95.7	Mo_IGKV6-25*01	100.0	L4	6	L4-6-1	11	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022