PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1NBV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV10S4*01	97.3	Mo_IGHV10S4*01	92.3	H1	13	H1-13-*	-1	AASGFSFNTNAMN	BBABEBAAABEBB
H	heavy	Mus.musculus	Mo_IGHV10S4*01	97.3	Mo_IGHV10S4*01	100.0	H2	12	H2-12-1	15	RIRSKsnNYATY	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV10S4*01	97.3	Mo_IGHV10S4*01	100.0	H3	12	H3-12-*	-1	VRDQTGTAWFAY	BBBBBLBBBLAB
H	heavy	Mus.musculus	Mo_IGHV10S4*01	97.3	Mo_IGHV10S4*01	87.5	H4	8	H4-8-*	-1	RDDSQNML	BBBLALBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	100.0	Mo_IGKV1-110*01	100.0	L1	16	L1-16-*	-1	RSSQSLvhsngNTYLH	BBABBABBBBLEBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	100.0	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	14	YKVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	100.0	Mo_IGKV1-110*01	100.0	L3	9	L3-9-cis7-1	12	SQSTHVPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	100.0	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022