PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1N5Y

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H1	15	H1-15-2	34	TFSGFSLSTSgiGVT	BBBLBBAABAABEBB
H	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H2	9	H2-9-1	29	TIWWDDDNR	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H3	15	H3-15-*	-1	AQSAITSvTDSAMDH
H	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H4	8	H4-8-1	16	KDTSNNQA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	81.8	L1	11	L1-11-*	-1	SASQDISSYLN	BBAEBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	100.0	L2	8	L2-8-1	14	YYTSSLHS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	85.7	L3	9	L3-9-cis7-1	16	QQYSKFPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	100.0	L4	6	L4-6-1	13	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022