PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1MOE

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	100.0	H1	13	H1-13-1	20	TASGFNIKDTYMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	90.0	H2	10	H2-10-1	23	RIDPANGNSK	BBBAALLBBB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	50.0	H3	14	H3-14-*	-1	APFGYYVSDYAMAY	BBBEEAABAABBAB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	18	ADTSSNTA	BBAAALBB
A	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	60.0	L1	15	L1-15-1	11	RAGESVDifgvGFLH	BBABBABBLLBBBBB
A	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	100.0	L2	8	L2-8-1	14	YRASNLES	BLEABBBB
A	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	85.7	L3	9	L3-9-cis7-1	24	QQTNEDPYT	BBBABBbBB
A	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	100.0	L4	6	L4-6-1	12	GSRTDF	EBEABB
B	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	60.0	L1	15	L1-15-1	18	RAGESVDifgvGFLH	BBABBABBLLBBBBB
B	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	100.0	L2	8	L2-8-1	9	YRASNLES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	85.7	L3	9	L3-9-cis7-1	13	QQTNEDPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	100.0	L4	6	L4-6-3	13	GSRTDF	EAAABB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	100.0	H1	13	H1-13-1	20	TASGFNIKDTYMH	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	90.0	H2	10	H2-10-1	12	RIDPANGNSK	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	50.0	H3	14	H3-14-*	-1	APFGYYVSDYAMAY	BBELAAABAAEBAB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	10	ADTSSNTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022