PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1MJ7

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S61*01	97.3	Mo_IGHV1S61*01	92.3	H1	13	H1-13-*	-1	kasgytftSSWIN
H	heavy	Mus.musculus	Mo_IGHV1S61*01	97.3	Mo_IGHV1S61*01	90.0	H2	10	H2-10-*	-1	NVYPgssSTN
H	heavy	Mus.musculus	Mo_IGHV1S61*01	97.3	Mo_IGHV1S61*01	50.0	H3	10	H3-10-*	-1	VRKDyswFPY
H	heavy	Mus.musculus	Mo_IGHV1S61*01	97.3	Mo_IGHV1S61*01	100.0	H4	8	H4-8-1	14	VDTSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	95.7	Mo_IGKV2-137*01	93.8	L1	16	L1-16-1	9	RSSKSLlhsngNTYLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	95.7	Mo_IGKV2-137*01	100.0	L2	8	L2-8-1	9	YRMSNLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	95.7	Mo_IGKV2-137*01	100.0	L3	9	L3-9-cis7-1	3	MQHLEYPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	95.7	Mo_IGKV2-137*01	83.3	L4	6	L4-6-3	8	GSETAF	EBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022