PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1MFA

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-5*01	86.3	Mo_IGHV1-5*01	84.6	H1	13	H1-13-1	9	KASGYTFTNYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	86.3	Mo_IGHV1-5*01	80.0	H2	10	H2-10-1	10	AIYPGNSATF	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	86.3	Mo_IGHV1-5*01	100.0	H3	11	H3-11-*	-1	TRGGHGYYGDY	BBBBBLBABAB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	86.3	Mo_IGHV1-5*01	75.0	H4	8	H4-8-1	7	AVTSTTTA	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	97.1	Mo_IGLV1*01	71.4	L1	14	L1-14-1	25	RSSTGTVTSgNHAN	BBAALBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	97.1	Mo_IGLV1*01	87.5	L2	8	L2-8-1	8	GDTNNRAP	BLLABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	97.1	Mo_IGLV1*01	62.5	L3	9	L3-9-1	9	ALWSNNHWI	BBBBLLBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	97.1	Mo_IGLV1*01	100.0	L4	6	L4-6-2	16	LIGDKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022