PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1MEX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S53*01	100.0	Mo_IGHV1S53*01	100.0	H1	13	H1-13-1	8	KASGYTFTDHAIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S53*01	100.0	Mo_IGHV1S53*01	100.0	H2	10	H2-10-1	7	YISPGNGDIK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S53*01	100.0	Mo_IGHV1S53*01	50.0	H3	7	H3-7-*	-1	KMEYLDY	BBBLBBB
H	heavy	Mus.musculus	Mo_IGHV1S53*01	100.0	Mo_IGHV1S53*01	100.0	H4	8	H4-8-1	8	ADKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	92.8	Mo_IGKV6-15*01	100.0	L1	11	L1-11-1	4	KASQNVGTNVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	92.8	Mo_IGKV6-15*01	100.0	L2	8	L2-8-1	4	YSASYRYS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	92.8	Mo_IGKV6-15*01	100.0	L3	9	L3-9-cis7-1	7	QQYNSYPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	92.8	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022