PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1MAM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	100.0	H1	13	H1-13-1	12	ATSGFTFTDYYMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	91.7	H2	12	H2-12-*	-1	FIRNKadGYTTE	BBBBBAAEBBBB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	66.7	H3	10	H3-10-*	-1	TRDPYGPAAY	BBLAAEAABB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	100.0	H4	8	H4-8-1	24	RDNSQSIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	90.9	L1	11	L1-11-2	9	RASQDIYNYLN	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	21	YYTSRLHS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	7	QQGNTLPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	15	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022