PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1LO4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	81.9	Mo_IGHV5-6-5*01	61.5	H1	13	H1-13-1	23	EASGFTLRTYGMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	81.9	Mo_IGHV5-6-5*01	66.7	H2	9	H2-9-1	10	SISYGGLLY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	81.9	Mo_IGHV5-6-5*01	100.0	H3	12	H3-12-*	-1	ARGTSFVRYFDV	BBBBBLABABAB
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	81.9	Mo_IGHV5-6-5*01	75.0	H4	8	H4-8-1	15	RDIVRNIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	94.2	Mo_IGKV1-117*02	81.2	L1	16	L1-16-1	14	RSSQTIvhtngNTYFE	BBABBBBBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	94.2	Mo_IGKV1-117*02	100.0	L2	8	L2-8-1	11	YKVSNRLS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	94.2	Mo_IGKV1-117*02	85.7	L3	9	L3-9-cis7-1	12	FQGSHSPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	94.2	Mo_IGKV1-117*02	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022