PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1KXT

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	92.3	H1	13	H1-13-*	-1	AASgyTFSSYPMG
B	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	66.7	H2	9	H2-9-1	12	RIFSDGSAN	BBBAALBBB
B	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	100.0	H3	21	H3-21-*	-1	AAGPGSgklvvagRTCYGPNY
B	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	75.0	H4	8	H4-8-*	-1	RDNAANTA	BALAALBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	92.3	H1	13	H1-13-*	-1	AASgyTFSSYPMG
D	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	66.7	H2	9	H2-9-1	17	RIFSDGSAN	BBBAALBBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	100.0	H3	21	H3-21-*	-1	AAGPGSgklvvagRTCYGPNY
D	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	75.0	H4	8	H4-8-*	-1	RDNAANTA	BALAALBB
F	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	92.3	H1	13	H1-13-*	-1	AASgyTFSSYPMG
F	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	66.7	H2	9	H2-9-1	13	RIFSDGSAN	BBBAALBBB
F	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	100.0	H3	21	H3-21-*	-1	AAGPGSgklvvagRTCYGPNY
F	heavy	Camelus.dromedarius	Ca_IGHV1S72*01_VHH	90.3	Ca_IGHV1S72*01_VHH	75.0	H4	8	H4-8-*	-1	RDNAANTA	BALAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022