PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1KTR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
L	heavy	Mus.musculus	Mo_IGHV1-26*01	91.8	Mo_IGHV1-26*01	100.0	H1	13	H1-13-1	9	KASGYTFTDYYMN	BBBLBBAAABBBB
L	heavy	Mus.musculus	Mo_IGHV1-26*01	91.8	Mo_IGHV1-26*01	100.0	H2	10	H2-10-1	9	DINPNNGGTS	BBBAAALBBB
L	heavy	Mus.musculus	Mo_IGHV1-26*01	91.8	Mo_IGHV1-26*01	0.0	H3	7	H3-7-*	-1	ESQSGAY	BBLLLAB
L	heavy	Mus.musculus	Mo_IGHV1-26*01	91.8	Mo_IGHV1-26*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	10	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	6	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	9	FQGSHVPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022