PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1KEG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-5*01	98.6	Mo_IGHV1-5*01	76.9	H1	13	H1-13-1	9	KASGYSFTSFWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	98.6	Mo_IGHV1-5*01	90.0	H2	10	H2-10-1	9	TIYPGNSDTS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	98.6	Mo_IGHV1-5*01	100.0	H3	13	H3-13-*	-1	TRRSGYKYYALDY	BBBBBBEALBBAB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	98.6	Mo_IGHV1-5*01	100.0	H4	8	H4-8-1	8	AVTSASTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	8	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	5	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	85.7	L3	8	L3-8-*	-1	FQGSLVPT	BBABEBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022