PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1KCS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-2*02	90.3	Mo_IGHV3-2*02	92.9	H1	14	H1-14-1	13	TVTSYSITsDYAWN	BBBLBBAAABEBBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	90.3	Mo_IGHV3-2*02	100.0	H2	9	H2-9-1	12	YISYSGSTS	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	90.3	Mo_IGHV3-2*02	100.0	H3	9	H3-9-*	-1	ARGGTGFPY	BBBABEBAB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	90.3	Mo_IGHV3-2*02	100.0	H4	8	H4-8-1	11	RDTSKNQF	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	87.0	Mo_IGKV6-20*01	100.0	L1	11	L1-11-1	11	KASENVGTYVS	BBABBAEAABB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	87.0	Mo_IGKV6-20*01	100.0	L2	8	L2-8-1	13	YGASNRYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	87.0	Mo_IGKV6-20*01	85.7	L3	9	L3-9-2	16	GQSYSSPLT	BBAABABBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	87.0	Mo_IGKV6-20*01	100.0	L4	6	L4-6-*	-1	GSATDF	EBLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022