PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1KC5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-2*02	94.4	Mo_IGHV3-2*02	100.0	H1	14	H1-14-1	9	TVTGYSITsDYAWN	BBBLBBAAABEBBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	94.4	Mo_IGHV3-2*02	88.9	H2	9	H2-9-1	13	YISYSGSTT	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	94.4	Mo_IGHV3-2*02	100.0	H3	9	H3-9-*	-1	ARGGTGFDY	BBBABEBAB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	94.4	Mo_IGHV3-2*02	100.0	H4	8	H4-8-1	18	RDTSKNQF	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	90.9	L1	11	L1-11-1	12	KASENVDTYVS	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	100.0	L2	8	L2-8-1	20	YGASNRYT	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	100.0	L3	9	L3-9-2	17	GQSYSYPLT	BBAABABBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	100.0	L4	6	L4-6-*	-1	GSATDF	EBLEBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022