PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1JFQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-58*01	89.0	Mo_IGHV1-58*01	84.6	H1	13	H1-13-1	8	KASGYTFTSNGIN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-58*01	89.0	Mo_IGHV1-58*01	50.0	H2	10	H2-10-1	9	YNNPGNGYIT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-58*01	89.0	Mo_IGHV1-58*01	100.0	H3	14	H3-14-2	22	ARSEYYGGSYKFDY	BBBBBBBLBBBBAB
H	heavy	Mus.musculus	Mo_IGHV1-58*01	89.0	Mo_IGHV1-58*01	62.5	H4	8	H4-8-1	5	VDKSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	81.8	L1	11	L1-11-2	5	RASQDINNFLN	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	62.5	L2	8	L2-8-1	5	YFTSRSQS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	85.7	L3	9	L3-9-cis7-1	7	QQGNALPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	6	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022