PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1J5O

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H1	15	H1-15-*	-1	TFSGFSLSTSgiGVT	BBBABBAABAABEBB
H	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H2	9	H2-9-1	20	TIWWDDDNR	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H3	15	H3-15-*	-1	AQSAITSvTDSAMDH
H	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H4	8	H4-8-1	25	KDTSNNQA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	81.8	L1	11	L1-11-2	19	SASQDISSYLN	BBAEBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	100.0	L2	8	L2-8-1	18	YYTSSLHS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	85.7	L3	9	L3-9-2	23	QQYSKFPWT	BBAABABBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	100.0	L4	6	L4-6-1	13	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022