PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1IKF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Mo_IGHV5-12*02	94.5	Mo_IGHV5-12*02	100.0	H1	13	H1-13-1	10	ATSGFTFSDYYMY	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV5-12*02	94.5	Mo_IGHV5-12*02	70.0	H2	10	H2-10-2	16	FISNGGGSAF	BBBAALABBB
H	heavy	Homo.sapiens	Mo_IGHV5-12*02	94.5	Mo_IGHV5-12*02	50.0	H3	19	H3-19-*	-1	TRHTLYDtlygnYPVWFAD
H	heavy	Homo.sapiens	Mo_IGHV5-12*02	94.5	Mo_IGHV5-12*02	100.0	H4	8	H4-8-1	6	RDNAKNTL	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	90.9	L1	11	L1-11-2	8	RASQDISTYLN	BBABBALLBBB
L	kappa	Homo.sapiens	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	75.0	L2	8	L2-8-1	15	FYTSRLRS	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	71.4	L3	9	L3-9-cis7-1	8	QQGSRIPPT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	13	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022