PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1IGT

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV15-103*01	95.7	Mo_IGKV15-103*01	100.0	L1	11	L1-11-1	22	HASQNINVWLS	BBABBAEABBB
A	kappa	Mus.musculus	Mo_IGKV15-103*01	95.7	Mo_IGKV15-103*01	100.0	L2	8	L2-8-1	16	YKASNLHT	BLEABBBB
A	kappa	Mus.musculus	Mo_IGKV15-103*01	95.7	Mo_IGKV15-103*01	100.0	L3	9	L3-9-cis7-1	11	QQGQSYPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV15-103*01	95.7	Mo_IGKV15-103*01	100.0	L4	6	L4-6-1	12	GSGTGF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV5-12*02	98.6	Mo_IGHV5-12*02	100.0	H1	13	H1-13-1	11	ATSGFTFSDYYMY	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-12*02	98.6	Mo_IGHV5-12*02	100.0	H2	10	H2-10-*	-1	YISNGGGSTY	BBBAAEEBBB
B	heavy	Mus.musculus	Mo_IGHV5-12*02	98.6	Mo_IGHV5-12*02	100.0	H3	11	H3-11-*	-1	ARHGGYYAMDY	BBBBEBLBBAB
B	heavy	Mus.musculus	Mo_IGHV5-12*02	98.6	Mo_IGHV5-12*02	100.0	H4	8	H4-8-*	-1	RDNAKNTL	BBBAALBB
C	kappa	Mus.musculus	Mo_IGKV15-103*01	95.7	Mo_IGKV15-103*01	100.0	L1	11	L1-11-1	13	HASQNINVWLS	BBABBAEABBB
C	kappa	Mus.musculus	Mo_IGKV15-103*01	95.7	Mo_IGKV15-103*01	100.0	L2	8	L2-8-1	13	YKASNLHT	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV15-103*01	95.7	Mo_IGKV15-103*01	100.0	L3	9	L3-9-cis7-1	18	QQGQSYPLT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV15-103*01	95.7	Mo_IGKV15-103*01	100.0	L4	6	L4-6-*	-1	GSGTGF	EBEBEB
D	heavy	Mus.musculus	Mo_IGHV5-12*02	98.6	Mo_IGHV5-12*02	100.0	H1	13	H1-13-1	23	ATSGFTFSDYYMY	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV5-12*02	98.6	Mo_IGHV5-12*02	100.0	H2	10	H2-10-2	16	YISNGGGSTY	BBBAALABBB
D	heavy	Mus.musculus	Mo_IGHV5-12*02	98.6	Mo_IGHV5-12*02	100.0	H3	11	H3-11-*	-1	ARHGGYYAMDY	BBBALALBBAB
D	heavy	Mus.musculus	Mo_IGHV5-12*02	98.6	Mo_IGHV5-12*02	100.0	H4	8	H4-8-1	22	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022