PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1IBG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV2-9*02	91.7	Mo_IGHV2-9*02	92.3	H1	13	H1-13-1	20	TVSGFSLTTYGVH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-9*02	91.7	Mo_IGHV2-9*02	66.7	H2	9	H2-9-1	20	LIWAGGNTD	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV2-9*02	91.7	Mo_IGHV2-9*02	100.0	H3	15	H3-15-*	-1	ARFRFAsYYDYAVDY
H	heavy	Mus.musculus	Mo_IGHV2-9*02	91.7	Mo_IGHV2-9*02	100.0	H4	8	H4-8-1	13	KDNSKSQV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	86.7	L1	15	L1-15-*	-1	RASKSVSTsgysHIH	BBABBABBEABBBBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	87.5	L2	8	L2-8-1	10	YLASILES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	85.7	L3	9	L3-9-cis7-1	17	QHSREYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022