PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1IAI

#CDRs = 8; #Clusters = 16.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	98.6	Mo_IGHV9-3-1*01	100.0	H1	13	H1-13-1	15	KASGYTFTNYGMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	98.6	Mo_IGHV9-3-1*01	100.0	H2	10	H2-10-1	14	WINTYTGEPT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	98.6	Mo_IGHV9-3-1*01	100.0	H3	14	H3-14-2	13	ARDGYYENYYAMDY	BBBBBBLLBBBBAB
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	98.6	Mo_IGHV9-3-1*01	100.0	H4	8	H4-8-1	15	LETSASTA	EBAAALBB
I	heavy	Mus.musculus	Mo_IGHV6-3*03	91.8	Mo_IGHV6-3*03	92.3	H1	13	H1-13-*	-1	VASGFTFNNYWMS	BBBLBABABBBBB
I	heavy	Mus.musculus	Mo_IGHV6-3*03	91.8	Mo_IGHV6-3*03	75.0	H2	12	H2-12-*	-1	EIRLNsdNFATH	BBBBBBLEBBBB
I	heavy	Mus.musculus	Mo_IGHV6-3*03	91.8	Mo_IGHV6-3*03	0.0	H3	12	H3-12-*	-1	VLRPLFYYAVDY	BBBBBBABBBBB
I	heavy	Mus.musculus	Mo_IGHV6-3*03	91.8	Mo_IGHV6-3*03	75.0	H4	8	H4-8-*	-1	RDDSKSRL	BBBABABB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	97.1	Mo_IGKV6-17*01	100.0	L1	11	L1-11-1	16	KASQDVSTAVA	BBABBAEAABB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	97.1	Mo_IGKV6-17*01	87.5	L2	8	L2-8-1	20	YSASYQYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	97.1	Mo_IGKV6-17*01	85.7	L3	9	L3-9-2	24	HQHYSTPFT	BBAABABBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	97.1	Mo_IGKV6-17*01	83.3	L4	6	L4-6-3	25	GSRTDF	EAAABB
M	kappa	Mus.musculus	Mo_IGKV4-53*01	95.7	Mo_IGKV4-53*01	100.0	L1	12	L1-12-1	14	SVSSSISsSNLH	BBABBBBAAABB
M	kappa	Mus.musculus	Mo_IGKV4-53*01	95.7	Mo_IGKV4-53*01	100.0	L2	8	L2-8-*	-1	YGTSNLAS	BEAABBAE
M	kappa	Mus.musculus	Mo_IGKV4-53*01	95.7	Mo_IGKV4-53*01	75.0	L3	9	L3-9-cis7-1	30	QQWNSYPYT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV4-53*01	95.7	Mo_IGKV4-53*01	100.0	L4	6	L4-6-1	16	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022