PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1I8K

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV17-127*01	93.9	Mo_IGKV17-127*01	90.9	L1	11	L1-11-2	11	MTSTDIDDDMN	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV17-127*01	93.9	Mo_IGKV17-127*01	100.0	L2	8	L2-8-*	-1	SEGNTLRP	BBLLBBBB
A	kappa	Mus.musculus	Mo_IGKV17-127*01	93.9	Mo_IGKV17-127*01	71.4	L3	9	L3-9-cis7-1	6	LQSFNVPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV17-127*01	93.9	Mo_IGKV17-127*01	83.3	L4	6	L4-6-1	11	GTGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV5-6*03	86.3	Mo_IGHV5-6*03	61.5	H1	13	H1-13-1	9	VTSGFTFRKFGMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-6*03	86.3	Mo_IGHV5-6*03	60.0	H2	10	H2-10-2	6	SISTGGYNTY	BBBAALABBB
B	heavy	Mus.musculus	Mo_IGHV5-6*03	86.3	Mo_IGHV5-6*03	33.3	H3	13	H3-13-2	19	TRGYSSTSYAMDY	BBBABAABABBAB
B	heavy	Mus.musculus	Mo_IGHV5-6*03	86.3	Mo_IGHV5-6*03	87.5	H4	8	H4-8-1	6	RENAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022