PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1HIM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	82.4	L1	17	L1-17-1	14	TSSQSLfnsgkqKNYLT	BBABBABBAAALBBBBB
H	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	100.0	L2	8	L2-8-1	12	YWASTRES	BLLABBBB
H	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	85.7	L3	9	L3-9-cis7-1	14	QNDYSNPLT	BBAABBbBB
H	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
J	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	82.4	L1	17	L1-17-1	14	TSSQSLfnsgkqKNYLT	BBABBABBAAALBBBBB
J	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	100.0	L2	8	L2-8-1	10	YWASTRES	BLLABBBB
J	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	85.7	L3	9	L3-9-cis7-1	15	QNDYSNPLT	BBAABBbBB
J	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
L	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	92.3	H1	13	H1-13-1	11	AASGFSFSSYGMS	BBBLBBAAABBBB
L	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	80.0	H2	10	H2-10-2	17	TISNGGGYTY	BBBAALABBB
L	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H3	13	H3-13-*	-1	ARRERYDENGFAY	BBBBAAALBEBAB
L	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H4	8	H4-8-1	8	RDNAKNTL	BBAAALBB
M	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	92.3	H1	13	H1-13-1	13	AASGFSFSSYGMS	BBBLBBAAABBBB
M	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	80.0	H2	10	H2-10-2	15	TISNGGGYTY	BBBAALABBB
M	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H3	13	H3-13-*	-1	ARRERYDENGFAY	BBBBAAALAEBAB
M	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H4	8	H4-8-1	16	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022